Projects

Machine learning on molecular dynamics simulations

Developed GNNs with PyTorch to predict displacement

Swarthmore U Wisconson

Large-scale Atomic/Molecular Massively Parallel Simulator (LAMMPS) simulations of bidisperse sheared granular systems are computationally intensive. So, this project explored the use of GNNs to predict horizontal displacements of particles in these systems, given their initial positions and particle types.

This involved extensive data processing, model architecture design, and hyperparameter tuning, and the work was done under Professor Amy Graves in collaboration with Professor Dane Morgan, Ajay Annamareddy, and Siddhant Ranka.

Julia software development for climate modeling

Open-source implementation of ice-phase microphysics scheme

CliMA

CliMA is an organization led by Professor Tapio Schneider at Caltech and MIT which has developed an open-source, ML-informed climate model in Julia. I worked in the microphysics group under Anna Jaruga to kickstart the development of a 2-moment, bulk, single-category hydrometeor scheme: the predicted particle properties (P3) scheme.

This involved not only implementing the code in Julia but also understanding the physics of the scheme, writing tests and documentation, and testing it in a 1-dimensional column model. Given the importance of clouds in determining Earth's energy balance, and given the major theoretical and observational uncertainties in cloud microphysics, this sort of work is crucial for improving our understanding of the climate system.

NSF REU at Washington State University Lab for Atmospheric Research (LAR)

Air Quality, Atmospheric Chemistry, and Climate Change: Measurements and Modeling in the Pacific Northwest

Washington State

Although the programming of this REU was based in atmospheric science, I worked with Fabio Scarpare on a project in the College of Agricultural, Human, and Natural Resources Sciences (CAHNRS) to study the effects of agricultural practices on soil hydrology in the context of Brazilian sugarcane cultivation.

The research involved calibration and testing of an in-house agricultural model, CropSyst. In RStudio, I worked with aboveground biomass, soil water content, and leaf area index observations in dialogue with multiyear model output. In the context of aridification and climate change in Brazil's agricultural wetlands, these efforts to understand the effect of surface crop residue on soil hydrology are important for sugarcane agriculture in the region.